PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009622624.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 476aa    MW: 54466.1 Da    PI: 4.3306
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009622624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.74.2e-18111553128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekew......yfFskrdkkyatgkrknr..atksgyW 83 
                      G+rF+Ptd+elv ++L + v++++l+ + +i+  d+yk ePw   +           e++w      yf ++r+k   ++ r +r    + g+W
  XP_009622624.1  11 EGYRFRPTDSELV-KFLLRFVAKQELHDNGFIAMYDVYKQEPWVTYShghstgG---VEDNWdtsiyrYFITPRKK---NKGRFSRivGKRGGTW 98 
                     69***********.99999999999999899************99633443331...2223333443344444444...34577773224599** PP

             NAM  84 katgkdkevlsk......kgelvglkktLvfykgrapkge......ktdWvmheyrl 128
                     k++ k ++v+ k      ++  +g  k++ + +++++k          +W+m+ey l
  XP_009622624.1  99 KQQDKGRAVTIKscderkRDLIIGRMKSMCYTEKNNNKCInsddynDGKWLMKEYVL 155
                     *********9988765444444**********76666654223333678******87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.58E-203177IPR003441NAC domain
PROSITE profilePS5100523.729179IPR003441NAC domain
PfamPF023651.1E-1312155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MNMMELDNLG EGYRFRPTDS ELVKFLLRFV AKQELHDNGF IAMYDVYKQE PWVTYSHGHS  60
TGGVEDNWDT SIYRYFITPR KKNKGRFSRI VGKRGGTWKQ QDKGRAVTIK SCDERKRDLI  120
IGRMKSMCYT EKNNNKCINS DDYNDGKWLM KEYVLSDPIL NKFSNSERKD YVICAIKKLP  180
KRSTTCNFSQ TSNVTTTMES CSEQEKVDTE VTSDINNYVD QPLMDQDYFV EKAIVESVEP  240
LMVETVGINS VKPLMDQEYT EMITPIYYVE EPMEESKVQS HEATGVENGS SLGLTTFSQF  300
QESMIADFEN AMQEFNVPEI MVRSDENMGC DTLLEKIQTQ DQEEEGCSFA VNEEHNIAFM  360
ESEVKATSFL ELLTGCRGYG MGNNQVQLVP DQSTTITTTM PQFLESWDRF YESSMSMSLV  420
PESTTMLNSN EIATGECDXT GECDTTPCSI IIIGYPLSRM TIYPSDFLCL AMIPYF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009622624.10.0PREDICTED: uncharacterized protein LOC104113990
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1500848
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-12NAC domain containing protein 47